Topics
- Biological ontologies
- Orthologs, paralogs, inparalogs, outparalogs, ...
- Similarity-based function prediction
- Phylogenomic inference
- Context-based function prediction
- Network based function prediction
- Functional modules
- Pseudogenes
- Identification of functionally important residues
- Structure-function relationships in proteins
- Practical limits of function prediction
- Horizontal gene transfer
- Reconstruction of metabolic pathways
- Disease-relevant mutations: analysis and prediction
- Alternative splicing and protein function
- Post-translational modificatiions
