Publikationen

2024

Liu C, Bai Z, Luo Y, Zhang Y, Wang Y, Liu H, Luo M, Huang X, Chen A, Ma L, Chen C, Yuan J, Xu Y, Zhu Y, Mu J, An R, Yang C, Chen H, Chen J, Li Z, Li X, Dong Y, Zhao J, Shen X, Jiang L, Feng X, Yu P^#, Wang D, Chen X, Li N (2024) Multiomics dissection of Brassica napus L. lateral roots and endophytes interactions under phosphorus starvation. Nature Communications 15: 9732
He X, Hochholdinger F, Chen X, Yu P^# (2024) Crop domestication and improvement reshape root traits and the structure and function of their associated microbiome. Frontiers of Agricultural Science & Engineering, online. doi.org/10.15302/J-FASE-2024593
Zhao J, Chen Y, Tao Q, Schreiber L, Suresh K, Frei M Alam MS, Li B, Zhou Y, Baer M, Hochholdinger F, Wang C, Yu P^# (2024) Enhanced CO₂ coordinates the spatial recruitment of diazotrophs in rice via root development. Plant Cell and Environment doi.org/10.1111/pce.15259.
Hosseini B, Cheraghi M, Hiesch S, Yu P^#, Zarebanadkouki M (2024) Contrasting rhizosheath formation capacities in two maize inbred lines: implications for water and nutrient uptake. Plant and Soil 1-17.
Zhou Y, Sommer ML, Meyer A, Wang D, Klaus A, Stöcker T, Marcon C, Schoof H, Haberer G, Schön C-C, Yu P, Hochholdinger (2024) Epidermis-specific transcriptomic responses reveal that cold mediates root hair developmental plasticity of maize via dreb2.1. Plant Physiology https://doi.org/10.1093/plphys/kiae449.
Hochholdinger F, Yu P^# (2024) Molecular concepts to explain heterosis. Trends in Plant Science, doi.org/10.1016/j.tplants.2024.07.018.
Yu B, Zhou C, Wang Z, Bucher M, Schaaf G, Sawers RJH, Chen X, Hochholdinger F, Zou C, Yu P^# (2024) Maize zinc uptake is influenced by arbuscular mycorrhizal symbiosis under various soil phosphorus availabilities. New Phytologist 243: 1936–1950.
Wang D, He X, Baer M, Lami K, Yu B, Tassinari A, Salvi S, Schaaf G, Hochholdinger F, Yu P^# (2024) Lateral root enriched Massilia associated with plant flowering in maize. Microbiome 12: 124.
He X, Wang D, Jiang Y, Li M, Delgado-Baquerizo M, McLaughlin C, Marcon C, Guo L, Baer M, Moya YAT., von Wirén N, Deichmann M, Schaaf G, Piepho H-P, Yang Z, Yang J, Yim B, Smalla K, Goormachtig S, de Vries F, Hüging H, Sawers RJH, Reif JC, Hochholdinger F, Chen X, Yu P^# (2024) Heritable microbiome variation is correlated with source environment in locally adapted maize varieties. Nature Plants 10: 598–617.
Yu P^#, Li C, Li M, He X, Wang D, Li H, Marcon C, Tegethof H, Klaus A, Perez-Limón S, Chen X, Delgado-Baquerizo M, Koller R, Metzner R, van Dusschoten D, Borisjuk L, Plutenko I, Mahon A, Resende Jr MFR, Salvi S, Akale A, Abdalla M, Ahmed MA, Bauer FM, Schnepf A, Lobet G, Heymans A, Suresh K, Schreiber L, McLaughlin CM, Li C, Mayer M, Schön C-C, Bernau V, von Wirén N, Sawers RJH, Wang T, Hochholdinger F (2024) Root system adaptation to water availability during maize domestication and global expansion. Nature Genetics 56: 1245–1256.
Wang Y, Yu P^#, Liu Y-X (2024)Metagenomic Analysis for Unveiling Agricultural Microbiome. Agronomy 14: 981.

2023

Xu F, Liao H, Yang J, Zhang Y, Yu P*, Cao Y, Fang J, Chen S, Li L, Sun L, Du C, Wang K, ang X, Feng Z, Cao Y, Li Y, Zhang J, Xu W (2023) Auxin-producing bacteria promote barley rhizosheath formation. Nature Communications 14: 5800.
Yu P, Hochholdinger F (2023) Genetic and environmental regulation of root growth and development. Chapter 13 in: Marschner´s Mineral Nutrition of Plants. 4th edition, in press.
Hochholdinger F, Yu P, Feix G (2023) Genetic Analysis of Maize Root Development. In: Plant Roots – The Hidden Half. 5th edition, in press.
Wang K, Zhang Z, Sha XQ, Yu P, Li Y, Zhang D, Liu X, He G, Li Y (2023) Identification of a new QTL underlying seminal root number in a maize-teosinte population. Frontiers in Plant Science 14: 1132017.

2022

Mahmud S, Ullah C, Kortz A, Bhattacharyya S, Yu P, Gershenzon J, Vothknecht UC (2022) Constitutive expression of JASMONATE RESISTANT 1 induces molecular changes that prime the plants to better withstand drought. Plant Cell & Environment 45: 2906–2922
Baldauf JA, Liu M, Vedder L, Yu P, Piepho H-P, Schoof H, Nettleton D, Hochholdinger F (2022) Single parent expression complementation contributes to phenotypic heterosis in maize hybrids. Plant Physiology 189: 1625–1638.

2021

Yu P, He X, Baer M, Beirinckx S, Tian T, Moya YAT, Zhang Y, Deichmann M, Frey FP, Bresgen V, Li C, Razavi BS, Schaaf G, von Wirén N, Su Z, Bucher M, Tsuda K, Goormachtig S, Chen X, Hochholdinger F (2021) Plant flavones enrich rhizosphere Oxalobacteraceae to improve maize performance under nitrogen deprivation. Nature Plants 7, 481–499.
Maize Genome Database Editorial Board Recommended Reading (www.maizegdb.org/hot_new_papers): 05/2021
Bonkowski M, Tarkka MT, Razavi BS, Schmidt H, Blagodatskaya E, Koller R, Yu P, Knief C, Hochholdinger F, Vetterlein D (2021) Spatiotemporal dynamics of maize (Zea mays L.) root growth and its potential consequences for the assembly of the rhizosphere microbiota. Frontiers in Microbiology 17: 619499.
Lang M, Zou W, Chen X, Zou C, Zhang W, Deng Y, Zhu F, Yu P, Chen X (2021) Microbial composition and phoD gene abundance are sensitive to phosphorus level in a long-term wheat-maize crop system. Frontiers in Microbiology 11: 605955.
Rüger L, Feng K, Dumack K, Chen Y, Sun R, Wilson M, Yu P, Sun B, Deng Y, Hochholdinger F, Vetterlein D, Bonkowski M (2021) Assembly patterns of the rhizosphere microbiome along the longitudinal root axis of maize (Zea mays L.) Frontiers in Microbiology 12: 614501

2019

Yu P^#, Hochholdinger F, Li C^# (2019) Plasticity of lateral root branching in maize. Frontiers in Plant Science 10: 363.
Kortz A, Hochholdinger F^#, Yu P^# (2019) Cell type-specific transcriptomics of lateral root formation and plasticity. Frontiers in Plant Science 10: 21.
Kreszies T, Shellakkutti N, Osthoff A, Yu P, Baldauf J, Zeisler-Diehl V, Ranathunge K, Hochholdinger F, Schreiber L (2019) Osmotic stress enhances suberization of apoplastic barriers in barley seminal roots: analysis of chemical, transcriptomic and physiological responses. New Phytologist 221: 180–194.

2018

Yu P, Wang C, Baldauf J, Tai H, Gutjahr C, Hochholdinger F, Li C (2018) Root type and soil phosphate determine the taxonomic landscape of colonizing fungi and the transcriptome of field-grown maize roots. New Phytologist 217: 1240–1253.
Yu P^#, Hochholdinger F^# (2018) The role of host genetic signatures on root-microbe interactions in the rhizosphere and endosphere. Frontiers in Plant Science 9: 1896.
Yu P, Marcon C, Baldauf JA, Frey F, Baer M, Hochholdinger F (2018) Transcriptomic dissection of maize root system development. In The Maize Genome, 1st ed. (eds. J Bennetzen, S Flint-Garcia, C Hirsch and R Tuberosa) pp. 247–257. Springer Nature.
Hochholdinger F, Yu P, Marcon C (2018) Genetic control of root system development in maize. Trends in Plant Science 23: 79–88.
Hochholdinger F, Marcon C, Baldauf J, Frey F, Yu P (2018) Proteomics of maize root development. Frontiers in Plant Science 9: 14.
Ashrafuzzaman M, Haque Z, Ali B, Mathew B, Yu P, Hochholdinger F, de Abreu Neto JB, McGillen MR, Ensikat H-J, Manning WJ, Frei M (2018) Ethylenediurea (EDU) mitigates the negative effects of ozone in rice: insights into its mode of action. Plant Cell & Environment 41: 2882–2898.

2016

Yu P, Gutjahr C, Li C, Hochholdinger F (2016) Genetic control of lateral root formation in cereals. Trends in Plant Science 21: 951–961.
Yu P, Baldauf JA, Lithio A, Marcon C, Nettleton D, Li C, Hochholdinger F (2016) Root type specific reprogramming of maize pericycle transcriptomes by local high nitrate results in disparate lateral root branching patterns. Plant Physiology 170: 1783–1798.

2015

Yu P, Eggert K, von Wirén N, Li C, Hochholdinger F (2015) Cell-type specific gene expression analyses by RNA-Seq reveal local high nitrate triggered lateral root initiation in shoot-borne roots of maize by modulating auxin-related cell cycle-regulation. Plant Physiology 169: 690–704.
Maize Genome Database Editorial Board Recommended Reading (www.maizegdb.org/hot_new_papers): 09/2015
Yu P, Hochholdinger F, Li C (2015) Root-type-specific plasticity in response to localized high nitrate supply in maize (Zea mays). Annals of Botany 116: 751–762.
Yu P, Li X, White PJ, Li C (2015) A large and deep root system underlies high nitrogen-use efficiency in maize production. PLoS ONE 10, e0126293.
Yu P, White PJ, Li C (2015) New insights to lateral rooting: differential responses to heterogeneous nitrogen availability among maize root types. Plant Signaling Behavior 10: e1013795.

2014

Yu P, Li X, Yuan L, Li C (2014) A novel morphological response of maize (Zea mays) adult roots to heterogeneous nitrate supply revealed by a split-root experiment. Physiologia Plantarum 150: 133–144.
Yu P, White P.J, Hochholdinger F, Li C (2014) Phenotypic plasticity of the maize root system in response to heterogeneous nitrogen availability. Planta 240: 667–678.

2013

Ning P, Li S, Yu P, Zhang Y, Li C (2013) Post-silking accumulation and partitioning of dry matter, nitrogen, phosphorus and potassium in maize varieties differing in leaf longevity. Field Crops Research 144: 19–27.
Peng Y, Yu P, Li X, Li C (2013) Determination of the critical soil mineral nitrogen concentration for maximizing maize grain yield. Plant and Soil 372: 41–51.

2012

Ning P, Liao C, Li S, Yu P, Zhang Y, Li X, Li C (2012) Maize cob plus husks mimics the grain sink to stimulate nutrient uptake by roots. Field Crops Research 130: 38–45.
Peng Y, Yu P, Zhang Y, Sun G, Ning P, Li X, Li C (2012) Temporal and spatial dynamics in root length density of ﬁeld-grown maize and NPK in the soil proﬁle. Field Crops Research 115: 85–93.
Zhang Y, Yu P, Peng Y, Li X, Chen F, Li C (2012) Fine root patterning and balanced inorganic phosphorus distribution in the soil indicate distinctive adaptation of maize plants to phosphorus deficiency. Pedosphere 22: 870–877.

2011

Yan H, Shang A, Peng Y, Yu P, Li C (2011) Covering middle leaves and ears reveals differential regulatory roles of vegetative and reproductive organs in root growth and nitrogen uptake in maize. Crop Science 51: 265–272.