MSCDB: A MASS SPECTROMETRY CENTRIC PROTEIN SEQUENCE DATABASE FOR PROTEOMICS

Project Members:	Harald Marx, Dr. Simone Lemeer, Susan Klaeger, Prof. Dr. Thomas Rattei, Prof. Dr. Bernhard Küster
Contact:	kuster[at]tum.de

Cancer cell line (COLO205, K562, OVCAR8, SKNBE2) data

RAW | SF3

Placenta data

RAW | MGF | SF3

The Mass Spectrometry Centric Database

MScDB.v1.00.MM.02.fasta

MScDB of IPI HUMAN v3.72 with Mismatch (T = 0, ... , 50)

-SELECT-

Use Case Databases

• MScDB.v1.00.MM.02.IPI.SRC.HUMAN.v3.72.fasta
• MScDB.v1.00.MM.02.IPI.VER.HUMAN.v3.00.v3.72.fasta
• MScDB.v1.00.MM.02.IPI.XENOGRAFT.HUMAN.MOUSE.v3.72.fasta
• MScDB.v1.00.MM.02.IPI.MOUSE.v3.72.fasta

Source Code

sourceforge.net or MScDB.v1.00.jar (Usage: java -jar MScDB.v1.00.jar)